生物、化学与医药学院 - Department of Biology, Chemistry, and Pharmacy
教育学与心理学学院 - Department of Education and Psychology
地球科学学院 - Department of Earth Sciences
历史与文化学学院 - Department of History and Cultural Studies
数学与计算机科学学院 - Department of Mathematics and Computer Science
哲学与文学学院 - Department of Philosophy and Humanities
物理学院 - Department of Physics
政治学与社会学学院 - Department of Political and Social Sciences
法学院 - Department of Law
动物医学院 - Department of Veterinary Medicine
经济学学院 - Department of Business and Economics
柏林夏瑞蒂医学院 ( 柏林自由大学与柏林洪堡大学合作学院)- Charité - Berlin School of Medicine (a joint institution of the Freie Universitaet Berlin and the Humboldt-Universitaet zu Berlin)
东欧研究中心Institute for East European Studies
拉丁美洲研究中心Institute for Latin American Studies
肯尼迪北美研究中心John F. Kennedy Institute for North American Studies